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Quantum Drug hit identification tool
Drug Hit Identification Tool calculates the IC50 (Kd, Ki, pKd) value of any protein-ligand complex, docks a small-molecule in the active site of a protein and performs screening a library of compounds against a target-protein or DNA/RNA. Hit Identification Tool consists of three modules: The IC50 module, 2) Ligand Docking and 3) Library Screening modules. Drug Hit Identification Tool can run both in Windows and Linux environments.
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Title: SOLUTION STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN COLLAGENASE-3 (MMP-13) COMPLEXED TO A POTENT NON-PEPTIDIC SULFONAMIDE INHIBITOR |
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Functional Class: Hydrolase/hydrolase Inhibitor Primary citation: Zhang, X.,Gonnella, N.C.,Koehn, J.,Pathak, N.,Ganu, V.,Melton, R.,Parker, D.,Hu, S.I.,Nam, K.Y. Solution structure of the catalytic domain of human collagenase-3 (MMP-13) complexed to a potent non-peptidic sulfonamide inhibitor: binding comparison with stromelysin-1 and collagenase-1. J.Mol.Biol. v301 pp.513-524, 2000 |
Abstract Title: Solution structure of the catalytic domain of human collagenase-3 (MMP-13) complexed to a potent non-peptidic sulfonamide inhibitor: binding comparison with stromelysin-1 and collagenase-1.
Keywords: Metazoa), Catalytic, Metallopeptidase, Inhibitors, Zinc, D1euba_, (homo, Molecular, Sandwich, Catalytic, Sulfonamides, Extracellular, Hydroxamic, Binding, Metalloproteases, Activity, Protein, Magnetic, Domain, Interstitial, Proteins, Zincin-like, 1-methyloxy-4-sulfone-benzene, Matrix, Collagenase, Study, Stromelysin, Collagenases, Spectroscopy, Domain, Homo, Human, Amino, Matrix, Domain), Proteolysis, Models, (a+b), Beta, Sapiens), (mmp-13), (sensu, (1eub:a), (catalytic, ("zincins"),, Data, Metalloendopeptidase, Comparative, Hydroxyaminovaline, 3-layer(aba), Binding, Calcium, Enzyme, Zinc, Alpha, Metalloproteases,, Sapiens, 3-methylpyridine, Acids, Beta, Resonance, Sequence, 1euba0, Humans, Collagenase, Acid, Collagenase-3, Machinery, Predictive powers, Simulation, Accuracy, Dissociation constant ligand docking, Optimize ligand alignments in torsional space, Performance, Kd, Relative selectivity associated, Confirmed, Yielded, Nanomolar, Correlation, Known, Cadd, Experimental, Comparison, Binding constant, Protein-ligand complexes, Proof of concept, Average, Absolute, Error, Kj/mol; relative error, Rmsd, Applications, Technology developers. platform, Range, Outstanding, Pkd, Molar, Dissolution, Dissociation constant, Pk receptor, Ab-initio first principals chemoinformatics, Sar, Pharmacological studies, Multigrid methods, Local optimization, Identification of low energy, Temperature, Nmol, Entropy contribution, Deactivate, Linear scaling, Quantum mechanics, Quantitative structure/activity relationship, Receptor are scored, Hierarchical filter, Genetic algorithm for protein-ligand docking,







