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Quantum Drug hit identification tool
Drug Hit Identification Tool calculates the IC50 (Kd, Ki, pKd) value of any protein-ligand complex, docks a small-molecule in the active site of a protein and performs screening a library of compounds against a target-protein or DNA/RNA. Hit Identification Tool consists of three modules: The IC50 module, 2) Ligand Docking and 3) Library Screening modules. Drug Hit Identification Tool can run both in Windows and Linux environments.
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Title: THE CRYSTAL STRUCTURE OF PHENYLALANYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH COGNATE TRNAPHE |
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Functional Class: Ligase/rna Primary citation: Goldgur, Y.,Mosyak, L.,Reshetnikova, L.,Ankilova, V.,Lavrik, O.,Khodyreva, S.,Safro, M. The crystal structure of phenylalanyl-tRNA synthetase from thermus thermophilus complexed with cognate tRNAPhe. Structure v5 pp.59-68, 1997 |
Abstract Title: The crystal structure of phenylalanyl-tRNA synthetase from thermus thermophilus complexed with cognate tRNAPhe.
Keywords: Thermus, Aquaticus), Phenylalanyl-trna, 1eiya0, Subunit,, (aars)-, Phet, Bira, Molecular, Sandwich, Acetyltransferase,, Catalytic, Synthetase, D1eiya2, Binding, Base, Dna-binding, Trna(phe), (1eiy:a), Aminoacylation, Ferredoxin-like, Anticodon-binding, Non-u.s., Barrel, Research, Phes, Proteins, Nucleic, Phenylalanine-trna, Activity, Protein, Domain, Protein;, Phenylalanyl-trna, Long, Nucleic, Fold, Acid, Synthetases, Aars, Trna-binding, Phers,, Alpha-hairpin, Class, Phenylalanyl-trna, Proteins, Phet,, Aminoacyl-trna, Domain, Central, Chain, 1eiyb3, 1eiyb4, 1eiyb5, 1eiyb6, Synthetase,, Gov't, X-ray, Amino, Support, E2p), Thermophilus, Phenylalanyl-trna, Models, Phers, (a+b), Conformation, Beta, Cytoplasm, Data, Rna-binding, B3/b4, 2-layer, Like,, Synthetase;, Bira, (phers), Biotin, Acid-binding, Translation, Anticodon, Synthetase, Bonding, Ligase, Trna, Phenyl-trna, Crystallography, 1eiyb2, (dihydrolipoamide, Mainly, (1eiy:b), Transfer, Binding, Sites, Protein, Putative, 1eiyb1, D1eiya1, Ob-fold, Ligase, Phers-beta,, Alpha, Acyl-trna, Bifunctional, Alpha-beta, (1eiy:c), Synthetases, D1eiyb6, Beta, Domains, Alpha, 3-layer(bba), Sequence, Hydrogen, (thermus, Plaits, D1eiyb5, D1eiyb4, Acid, D1eiyb1, Bacteria, D1eiyb3, D1eiyb2, Machinery, Predictive powers, Simulation, Accuracy, Dissociation constant ligand docking, Optimize ligand alignments in torsional space, Performance, Kd, Relative selectivity associated, Confirmed, Yielded, Nanomolar, Correlation, Known, Cadd, Experimental, Comparison, Binding constant, Protein-ligand complexes, Proof of concept, Average, Absolute, Error, Kj/mol; relative error, Rmsd, Applications, Technology developers. platform, Range, Outstanding, Pkd, Molar, Dissolution, Dissociation constant, Pk receptor, Ab-initio first principals chemoinformatics, Sar, Pharmacological studies, Multigrid methods, Local optimization, Identification of low energy, Temperature, Nmol, Entropy contribution, Deactivate, Linear scaling, Quantum mechanics, Quantitative structure/activity relationship, Receptor are scored, Hierarchical filter, Genetic algorithm for protein-ligand docking,







