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Quantum pKa calculation module

QUANTUM pKa module identifies all possible ionized species of a given small molecule and calculates their concentration in the whole range of pH (from 0 to 14). Quantum ionization constant prediction technology is applicable to any molecular structure. You can order pka research services based on protein structure indicated below or purchase Quantum software to do research in-house:


PDB ID: 1VQM

Title: The structure of the transition state analogue "DAN" bound to the large ribosomal subunit of haloarcula marismortui

Functional Class: Ribosome

Primary citation: Schmeing, T.M.,Huang, K.S.,Kitchen, D.E.,Strobel, S.A.,Steitz, T.A. Structural Insights into the Roles of Water and the 2' Hydroxyl of the P Site tRNA in the Peptidyl Transferase Reaction. Mol.Cell v20 pp.437-448, 2005

Abstract Title: Structural insights into the roles of water and the 2' hydroxyl of the P site tRNA in the peptidyl transferase reaction.

Keywords: Synthetic, (1vqm:c), L29p, (1vqm:h), Sodium, Potassium, L14p, Ribosomal, L21e, Protein, (1vqm:p), (1vqm:s), L15p, L24e, (1vqm:b), L15e, L32e, (1vqm:k), Protein, (1vqm:e), (1vqm:r), (1vqm:x), Ribosomal, (1vqm:m), (1vqm:z), (1vqm:1), (1vqm:j), Cadmium, Puromycin-5'-monophosphate, L37e, Acidic, Pseudouridine-5'-monophosphate, 5'-r(*cp*cp*(ppu)p*(po2)p*(da)p*c*c)-3'), O2'-methylguanosine-5'-monophosphate, (1vqm:d), (1vqm:l), (1vqm:0), Strontium, (1vqm:u), (1vqm:9), L7ae, 5'-monophosphate, 2'-deoxyadenosine-5'-monophosphate, L18p, (1vqm:g), L39e, 6-hydro-1-methyladenosine-5'-monophosphate, Archaea, (1vqm:o), Marismortui, L10e, Construct, (1vqm:t), L18e, Chloride, L31e, (1vqm:f), 3-methyluridine-5'-monophoshate, L44e, L19e, Magnesium, L37ae, (1vqm:3), Haloarcula, L24p, (1vqm:w), L11p, O2'-methyluridine, L23p, (1vqm:a), Protein, (1vqm:n), L13p, (1vqm:2), (1vqm:v), Homolog, L22p, Hypophosphite, L30p, (1vqm:4), (1vqm:y), (1vqm:i), Ribosomal, (1vqm:q), Pka shift, Prediction of microscopic dissociation constant, Software for calculation of microscopic dissociation constant, Pka database, Software for prediction of microscopic dissociation constant, Pka calculator, Fully ionize in solution, Ionization potential, Calculation of macroscopic dissociation constant, Prediction of macroscopic dissociation constant, Pka inhibitors, Knowledge databases, Ionization constant ka, Chemical ionization, Decay constant, Software for calculation of macroscopic dissociation constant, Software for prediction of macroscopic dissociation constant, Calculation of macroscopic dissociation constant, Prediction of macroscopic dissociation constant, Software for calculation of macroscopic dissociation constant, Software for prediction of macroscopic dissociation constant, Pka dissociation, Base ionization constants, Ionization constant for, Predict ionization constant, Acid-base dissociation constant, Predicted pka, |experimental pka, Electron ionization, Water constant, Calculation software and services, Predict ionization constant, Acid-base dissociation constant, Pka ph, Experimental pka, ,


 
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